An Ecological Imbalance Induced by a Non-Native Species: The Manila Clam in the Venice Lagoon

Among the 19 non-native species of marine invertebrates which have invaded the Venice Lagoon and have established populations, Ruditapes philippinarum, deliberately introduced in 1983, is surely the most successful species. According to the hypothesis that alien species invasion could be favoured by an altered ecological, chemical or physical state of the system induced by anthropogenic disturbance, R. philippinarum turned out to be ‘the right species at the right moment’. By comparing historical data (1968, 1985, 1990) with 1999 data, changes in macrobenthic community, in particular bivalve molluscs, of the lagoon induced by R. philippinarum introduction and subsequent clam exploiting activity were assessed. It has been possible to describe a sharp reduction, both in terms of distribution area and density, of all other filter feeder bivalves. Moreover, by using the clearance rate of the most abundant bivalve species in 1990 and 1999 (Cerastoderma glaucum and R. philippinarum, respectively), it was possible to estimate that the filtration capacity, expressed as l h⁻¹ m⁻², has more than doubled. This has altered the functioning of the ecosystem, resulting in a stronger benthic–pelagic coupling. In this context, R. philippinarum attains control of the system. Considering all this, it is possible to state that the Venice Lagoon ecosystem has entered into a new state, probably more resistant but less resilient, with implications for future management choices.     

Sedimentology of the Upper Triassic reef complex at the Hochkönig Massif (Northern Calcareous Alps,Austria)

Summary The Upper Triassic Dachsteinkalk of the Hochk?nig Massif, situated 50 km south of Salzburg in the Northern Calcareous Alps, corresponds to a platform margin reef complex of exceptional thickness. The platform interior limestones form equally thick sequences of the well known cyclic Lofer facies. Sedimentation in the reef complex was not so strongly controlled by low-amplitude sea-level oscillations as was the Lofer facies. The westernmost of the 8 facies of the reef complex is an oncolite-dominated lagoon, in which wave-resistant stromatolite mounds with a relief of a few metres were periodically developed. The transition to the central reef area is accomplished across the back-reef facies. In the back-reef facies patch reefs and calcisponges appear. The proportion of coarse bioclastic sediment increases rapidly over a few hundred metres before the central reef area is encountered. The central reef area consists of relatively widely spaced small patch reefs that did not develop wave-resistant reef framework structures. The bulk of the sediment in the central reef area is coarse bioclastic material, provided by the dense growth of reef organisms and the wave-induced disintegration of patch reefs. Collapse of the reef margin is recorded by the supply of large blocks of patch reef material to the upper reef slope. Additionally, coarse, loose bioclastic debris was supplied to the upper reef slope and this was incorporated into debris flows on the reef slope and turbidites found at the base of the slope and in the off-reef facies. Partially lithified packstones and wackestones of the lower to middle reef slope were modified by mass movement to form breccia and rudstone sheets. The latter reach out hundreds of metres into the off-reef facies environment. A reef profile is presented which was derived by the restoration of strike and dip information. In conjunction with constraints imposed by sedimentary facies related to slope processes, the angle of slope in the reef margin area ranged from 11° to 5°, forming a concave (dished downwards) slope. Water depth estimations require that the central reef area did not develop in water of less than 10 metres depth. At the reef margin water depths were about 30 metres, at the base of the reef slope 200 metres and deepening in the off-reef facies to 250 metres. While previous work on reef complexes from this type of setting suggests growth in a heavily storm-dominated environment, the present author finds little evidence for the storm generation of the fore reef breccias, although there is good evidence for storm-influenced sedimentation and reworking in the central reef area. Post-depositional processes were characterised by continued slope processes causing brecciation and hydraulic injection of red internal sediments downwards into the reef slope and off-reef limestones. Hydrothermal circulation caused a number of phases of post-depositional (diagenetic) brecciation. There appears not to have been an important period of emergence at the Triassic/Jurassic boundary.     

Transport and accumulation of sediment and contaminants in the Lagoon of Kuršiųmarios (Lithuania) and Baltic Sea

In this paper an overview is given of earlier work on transport, deposition AND transformation of suspended matter, and contaminants (metals, hydrocarbons) in Lithuanian coastal waters as well as in other parts of the Baltic Sea. The Lithuanian river Nemunas dischargesc. 600.10⁶ kg suspended matter into the Kuršių Marios Lagoon annually, of which two thirds are accumulated in the lagoon. The remainder is exported to the Baltic Sea through the Klaipéda Strait influencing biological activity in the coastal zone. Sedimentation rate in Kuršių Marios Lagoon is estimated at 3.2 mm y⁻¹. In the last 50 years the surface area of the lagoon decreased by 0.7 km² y⁻¹. Concentration profiles of metals and hydrocarbons were measured in the Kuršių Marios Lagoon, the Baltic proper, and in the Gulf of Finland. Among hydrocarbons both anthropogenic and compounds from natural sources are present. It is argued that correct interpretation of concentration horizons in sediment may be hampered by various processes,e. g. early sedimentogenesis and diagenesis, and cyclic salinity changes in the Baltic Sea.     

Velvet worm (Phylum Onychophora) on a sand island,in a wetland: Flushed from a Pleistocene refuge by recent rainfall?

Velvet worms (Onychophora) are restricted to moist, humid microclimates, but are poorly known from south‐east Queensland, Australia, where they are typically rainforest fauna. We made the unlikely observation of one of these invertebrates clinging to floating debris in a wetland on North Stradbroke Island. Palaeoecology of this wetland reveals that it once was within rainforest and has remained moist for at least the past 80 000 years, thus potentially harbouring an onychophoran population as a relic of a past broader, rainforest distribution. The presence of this animal, floating in the wetland, can be explained by recent climate, since the wetland filled following heavy rainfall shortly before the observation. This highlights the importance of groundwater‐fed wetlands as evolutionary refugia for moisture‐dependent biota.     

Caractérisation des peuplements de macroinvertébrés benthiques à l’aide de la carte auto-organisatrice (SOM)

Macrobenthic organisms are much used nowadays as bio-indicators for their ability to reflect different disturbances of aquatic ecosystems. However, they have never been used to assess the ecological status of the lagoons of Benin. The current study aims at revealing the ecological state of the lagoon of Porto-Novo through the study of changes in the settlement of benthic organisms collected in this lagoon. The sampling was carried out from July 2007 to June 2009 on a frequency of four seasons of collection per year. The self-organizing map (SOM) of Kohonen has been used for various patterns of distribution of collected organisms. A discriminant analysis (AFD) has allowed the identification of the parameters that govern the patterns observed in this environment. Four groups of macrobenthic communities emerged that were well predicted (75%). The distribution of benthic macro invertebrates of this lagoon is therefore zonal, seasonal and discriminated by variables of mineralization and sediment grain size. The difference in taxonomic richness corresponds to environmental conditions of stations appearing more or less stable and highlighting a gradient of the stress on organisms. Places with unstable conditions are affected by human activities due to their proximity to homes that are enriched in organic matter. These places are full of polluted-tolerant species such as the Gastropods Potamididae, Cirratulidae Polychaetes, Diptera Chironomidae and Oligochaeta. The macrobenthic fauna, which is well differentiated in the groups, is then subjected to human disturbance.     

Linear skin markings in common bottlenose dolphins (Tursiops truncatus) from the Indian River Lagoon,Florida

A previously undescribed skin abnormality, referred to as “linear skin markings” (LSM), has been identified in free-ranging common bottlenose dolphins (Tursiops truncatus) in the Indian River Lagoon, Florida (IRL). The lesions were identified during photo-identification surveys conducted from 2002 and 2015. LSM presented as distinct, parallel lines running dorso-ventrally on the torso and varied in length and width. The goals of this study were to determine (1) prevalence of the condition in IRL dolphins, (2) age and sex distribution of affected animals, (3) spatial and temporal distribution patterns, (4) duration of the condition, and (5) development of hypotheses regarding the etiology of the condition. Among 1,357 individual dolphins identified during the study period, 96 (7.0%) showed evidence of LSM. Nearly all (98.8%) cases with an established home range occurred in the northern and central regions of the IRL. The majority of cases of known sex were female (85%), of which 100% had given birth to one or more calves. The mean age of animals with LSM when first observed was 7.3 with a range of 1–20 years. The maximum observed duration of LSM was 15 years. Once observed, the condition persisted indefinitely. The etiology of LSM has not been established.     

Morphological differentiation among populations of Sarotherodon melanotheron melanotheron Rüppell 1852 across the West African Lagoon systems (Benin,Cameroon, Nigeria,Togo)

Morphometric variation among populations of Sarotherodon melanotheron melanotheron across its natural range (Mahin, epe, Lekki, Apese, Kuramo, Lagos, Iyagbe, Ologe, Badagry, Yewa – Nigeria; Be Lagoon – Togo; Idenau – Cameroon, Aheme – Benin; Portonovo – Benin) were studied to assess the level of differentiation of one of the populations that is currently isolated from the rest, the Apese Lagoon population. S. m. melanotheron showed subtle differentiation from some of the other lagoon populations. However, the pattern of variation did not reflect the level of geographical barriers or geographical distance among populations. The characters that form the basis of the differentiation observed were mostly those related to feeding, vision and respiration.     

Ammonia removal from livestock wastewater by ammonia-assimilating microorganisms immobilized in polyvinyl alcohol

We isolated ammonia-assimilating microorganisms from the livestock manure treatment systems and evaluated their ammonia-assimilating ability. Many isolates utilized ammonia at high rates when they were purely cultivated in a nitrogen-limited medium to which sterilized lagoon extract had been added. Some isolates that were immobilized in polyvinyl alcohol (PVA) utilized ammonia present in the media containing viable lagoon microorganisms. Staining with 4′,6′-diamidino-2-phenylindole (DAPI) indicated that the immobilized high ammonia-assimilating isolates grew dominantly within the PVA beads. High ammonia-assimilating isolates in the mixed culture containing viable lagoon microorganisms were identified as Pseudomonas spp. and member of Rhizobiaceae species by partial sequencing of the 16S ribosomal DNA.     

Assessing California's bar-built estuaries using the California Rapid Assessment Method

Bar-built estuaries are generally found at the mouths of smaller watersheds with seasonal precipitation, episodic streamflow and seasonal swell dynamics. Low streamflows and constructive wave forces form a sand bar at the mouth isolating the stream from the ocean, creating a ponded lagoon, and inundating the surrounding marsh plain. Bar-built estuaries are wide spread in California comprising over 50 percent of California's more than 500 estuaries. By connecting terrestrial, freshwater, and marine realms bar-built estuaries are complex and dynamic providing great habitat and ecosystem services. California has suffered some of the highest losses of wetland habitats, and the wetland habitats of bar-built estuaries continue to be threatened by further development, pollution, and climate related changes including diminished streamflows and sea level rise. Given this loss and threat we developed a California Rapid Assessment Method (CRAM) to assess the condition of California's bar-built estuaries. CRAM uses visual indicators to accurately reflect current wetland condition with regards to buffer habitat, hydrology, physical complexity, plant diversity and structure, and landscape influences. Here we validate this method by comparing results of CRAM for bar-built estuaries to other accepted measures of wetland condition that we simultaneously collected with CRAM including vegetative surveys, water nutrient levels, and GIS landscape scale measures of stress for 32 sites throughout California. CRAM correlated well with each of these three independent methods of assessing condition. Notably, the Environmental Monitoring and Assessment Program (EMAP) number of natives metric significantly correlated with CRAM Index and all Attribute scores. The strong correlations of CRAM to nutrient levels is particularly important considering the documentation of the negative impact of nutrients on fish populations, the use of bar-built estuaries by juveniles of commercially important species, and the nursery role of bar-built estuaries for maintaining imperiled populations of species such as steelhead. GIS measured percent impervious, percent agriculture, and percent dams all correlated well with expected CRAM Attribute scores at appropriate watershed scales relative to the area of inference for each CRAM metric. Further, CRAM for bar-built estuaries works well throughout California's diversity of environmental conditions and regardless of geography, timing, or whether the bar was open or closed during the survey. We hope that the availability of CRAM combined with available data repositories will enable local, state, and federal decision makers to better manage, restore, and conserve valuable bar-built estuaries in the face of continual threats like development, drought, and sea level rise.     

Deposition and cycling of carbon and nitrogen in carbonate mud of the lagoons of Arlington and Sudbury Reefs, Great Barrier Reef

The dynamics of carbon and nitrogen in carbonate mud were examined in the lagoons of Arlington and Sudbury Reefs, Great Barrier Reef. Most (89–93%) of the organic carbon and total nitrogen depositing to the carbonate mud zones was mineralized over a sediment depth of 1 m, with ∼50% of CO₂ produced during microbial decomposition involved in carbonate precipitation/dissolution reactions. There was proportionally little burial of organic carbon (10–11%) or nitrogen (7–10%). Nitrogen budgets suggest rapid turnover of porewater inorganic N pools on the order of hours to a few days. Incubation experiments indicate carbonate dissolution in surface deposits (≤20 cm depth) and carbonate precipitation in deeper sediments. Depth-integrated reaction rates indicate net carbonate precipitation of 7–10 mol CaCO₃ m² year⁻¹ over a depth of 1 m. Budget calculations at the whole-reef scale imply that deposition of CaCO₃ in the mud zones of both lagoons may equate to 50–90% of total reef carbonate production, with organic carbon fluxes equating to nearly all net primary production on each reef. These biogeochemical estimates point to the functional importance of carbonate mud zones in the lagoons of the shelf reefs of the Great Barrier Reef.